Journal of Otolaryngology and Ophthalmology of Shandong University ›› 2019, Vol. 33 ›› Issue (3): 79-87.doi: 10.6040/j.issn.1673-3770.1.2019.008

• Original Article • Previous Articles     Next Articles

Association of Toll-like receptor pathway gene polymorphisms with allergic rhinitis

Ruoxi CHEN1,Qingzhao ZHANG1,Meiping LU1,Xinjie ZHU1,Lei CHENG1,2,3()   

  1. 1. Department of Otorhinolaryngology, The First Affiliated Hospital, Nanjing Medical University, Nanjing 210029, Jiangsu, China
    2. International Centre for Allergy Research, Nanjing Medical University, Nanjing 210029, Jiangsu, China
    3. The Institute of Allergy and Autoimmune Disease,Jiangsu Clinical Medicine Research Institution,Nanjing 210029,Jiangsu,China
  • Received:2019-02-15 Revised:2019-05-06 Online:2019-05-20 Published:2019-08-07
  • Contact: Lei CHENG E-mail:chenglei@jsph.org.cn

Abstract: Objective

The involvement of the Toll-like receptor (TLR) signaling pathway in allergic rhinitis (AR), asthma, and other allergic diseases is being intensively studied. The present study assessed the correlation between TLR pathway gene single nucleotide polymorphisms (SNPs) and incidence of AR, and investigated the influence of SNPs in the pathogenesis of AR.

Methods

Candidate TLR pathway SNPs were screened by a search of a bioinformatics database system using the TaqMan SNP genotyping system as part of a hospital-based case-control study of 452 AR patients and 491 healthy controls. Serum levels of eosinophil cationic protein, total IgE, and allergen-specific IgE were measured by the Immuno CAP blood test.

Results

Six SNPs were identified (TLR2 rs7656411, rs76112010, rs7682814 and CD14 rs2563298, rs2569190, rs2569191). Genotype frequencies of CD14 rs2563298 and rs2569191 were significantly different between the cases and controls (P<0.05). AR patients with asthma were significantly associated with the rs7656411, rs2563298, and rs2569191. Genotype frequencies of TLR2 rs7656411 were significantly different between controls and the male and history case subgroups. Significant differences were also found in genotypes of CD14 rs2563298 and rs2569191 compared with control and subgroups of cases. Gene interaction analysis revealed a three-locus interaction involving TLR2 rs7656411, CD14 rs2563298, and CD14 rs2569191 in AR cases.

Conclusion

Polymorphisms of TLR2 and CD14 in the TLR pathway may contribute to susceptibility of AR in this Chinese population.

Key words: Allergic rhinitis, Toll-like receptors, CD14, Single nucleotide polymorphism, Genetic association studies

CLC Number: 

  • R765.21

Table 1

Primary information of TLR2 and CD14 SNPs"

序号 SNPs 染色体位置 碱基变化 最小等位基因(MAF) HWE P a
数据库 病例组 对照组
1 rs7656411 3′near gene G/T 0.419 0.482 0.451 0.168
2 rs76112010 5′near gene A/G 0.136 0.203 0.169 0.661
3 rs7682814 5′near gene A/G 0.167 0.202 0.172 0.286
4 rs2563298 3′UTR A/C 0.151 0.123 0.184 0.067
5 rs2569190 5′UTR A/T 0.500 0.380 0.412 0.988
6 rs2569191 5′near gene C/T 0.453 0.363 0.426 0.625

Table 2

Distribution of selected variables between cases and controls"

变量 病例组 (n = 452) 对照组 (n = 495) P
年龄 (岁, x ˉ ± s ) 19.70 ± 12.60 20.10 ± 12.61 0.597a
性别[n(%)]
302(66.8) 303(61.2) 0.073a
150(33.2) 192(38.8)
鼻炎病程 (年, x ˉ ± s ) 6.62 ± 5.87
鼻腔总症状 ( x ˉ ± s ) 5.25 ± 2.39
血清总IgE [kU/L, M (IQR)] 264.0 (120.6~593.5) 26.8 (11.1~52.2) < 0.001b
特异性IgE [kUA/L, M (IQR)]
屋尘螨 29.0(4.6~72.5)
粉尘螨 24.1 (5.0~69.9)
ECP [μg/L, median(IQR)] 12.7 (5.2~28.7) 4.6 (3.1~7.5) < 0.001b
伴随哮喘
118(26.1)
271(60.0)
家族史
122(27.0)
269(59.5)

Table 3

Genotypes and allele frequencies of TLR2 and CD14 polymorphisms among cases and controls"

SNPs 基因型 病例组 对照组 Crude OR(95%CI)

Adjusted OR

(95%CI)a

P b
n % n %
TLR2
rs7656411 n = 441 n =493
GG 112 25.4 156 31.6 1.00 (reference) 1.00 (reference) 0.079
GT 233 52.8 229 46.5 1.42 (1.05~1.92) 1.41 (1.04~1.91)
TT 96 21.8 108 21.9 1.23 (0.86~1.79) 1.22 (0.84~1.76)
GT/TT 329 74.6 337 68.4 1.36 (1.02~1.81) 1.35 (1.01~1.79) 0.035
T allele 0.451 0.186
rs76112010 n = 446 n = 485
GG 287 64.4 331 68.3 1.00 (reference) 1.00 (reference) 0.144
GA 137 30.7 141 29.1 1.12 (0.84~1.49) 1.15 (0.86~1.53)
AA 22 4.96 13 2.7 1.95 (0.97~3.95) 1.98 (0.98~4.02)
GA/AA 159 35.7 154 31.2 1.19 (0.91~1.53) 1.22 (0.93~1.60) 0.209
A allele 0.203 0.089
rs7682814 n = 441 n = 486
GG 285 64.6 330 67.9 1.00 (reference) 1.00 (reference) 0.074
GA 134 30.4 145 29.8 1.07 (0.81~1.42) 1.09 (0.82~1.45)
AA 22 5.00 11 2.26 2.32 (1.10~4.86) 2.29 (1.09~4.81)
GA/AA 42 15.9 38 13.9 1.15 (0.88~1.52) 1.17 (0.90~1.55) 0.292
A allele 0.202 0.097
CD14
rs2563298 n = 434 n =479
CC 336 77.4 326 68.1 1.00 (reference) 1.00 (reference) 0.003
CA 89 20.5 131 27.3 0.66 (0.48~0.90) 0.65 (0.48~0.89)
AA 9 2.1 22 4.60 0.40 (0.18~0.88) 0.40 (0.18~0.89)
CA/AA 98 68.5 153 31.9 0.62 (0.46~0.84) 0.62 (0.46~0.83) 0.002
A allele 0.123 <0.001
rs2569190 n = 450 n = 481
AA 174 38.7 166 34.5 1.00 (reference) 1.00 (reference) 0.351
AG 210 46.7 233 48.4 0.86 (0.65~1.14) 0.86 (0.64~1.15)
GG 66 14.7 82 17.1 0.78 (0.88~1.92) 0.76 (0.52~1.94)
AG/GG 276 61.3 315 65.5 0.84 (0.52~1.31) 0.84 (0.64~1.09) 0.188
G allele 0.380 0.150
rs2569191 n = 441 n = 472
CC 187 42.4 153 32.4 1.00 (reference) 1.00 (reference) 0.008
CT 188 42.6 236 50.0 0.65 (0.49~0.87) 0.65 (0.48~0.87)
TT 66 15.0 83 17.6 0.65 (0.44~0.96) 0.64 (0.44~0.95)
CT/TT 254 57.6 319 67.6 0.65 (0.50~0.85) 0.65 (0.49~0.85) 0.002
T allele 0.363 0.006

Table 4

Stratification analyses of TLR2 and CD14 polymorphisms in MW/MM genotype in AR subgroups"

变量 分组 rs7656411 病例/对照 rs2563298 病例/对照 rs2569191 病例/对照
例数

Adjusted OR

(95%CI)b

例数

Adjusted OR

(95%CI)b

例数

Adjusted OR

(95%CI)b

年龄(岁) <18 247/239 1.33(0.88~1.99) 244/239 0.54(0.36~0.80) 247/236 0.65(0.44~0.94)
≥18 194/254 1.36(0.91~2.06) 191/240 0.73(0.47~1.13) 194/236 0.66(0.44~0.98)
性别 295/303 1.60(1.12~2.30) 289/296 0.75(0.52~1.07) 293/289 0.66(0.47~0.93)
146/190 0.97(0.60~1.57) 146/183 0.42(0.25~0.72) 148/183 0.62(0.40~0.98)
哮喘 263/493 1.28(0.81~2.03) 261/479 0.45(0.27~0.75) 262/472 0.53(0.35~0.81)
116/493 1.61(1.13~2.28) 115/479 0.60(0.42~0.85) 116/472 0.70(0.51~0.96)
家族史 120/493 1.20(0.76~1.89) 118/479 0.56(0.35~0.92) 120/472 0.85(0.56~1.31)
260/493 1.64(1.16~2.33) 260/479 0.55(0.38~0.79) 260/472 0.57(0.42~0.78)
VAS <5 247/493 1.25(0.88~1.77) 241/479 0.65(0.45~0.92) 246/472 0.72(0.52~0.99)
≥5 194/493 1.45(0.99~2.12) 193/479 0.60(0.40~0.88) 195/472 0.57(0.41~0.80)
IgE a 135/493 1.41(0.99~2.00) 234/479 0.45(0.31~0.67) 237/472 0.61(0.44~0.84)
206/493 1.31(0.90~1.89) 200/479 0.82(0.57~1.19) 204/472 0.71(0.50~0.99)

Table 5

Multifactor dimensionality reduction models for locus-locus interactions"

模型a 训练样本准确度 检测样本准确度

交叉验证一致

P
A6 0.5491 0.5264 8/10 0.0036
A3 A6 0.5712 0.5196 8/10 < 0.0001
A1 A4 A6 0.5953 0.5487 8/10 < 0.0001

Fig.1

Tree diagram of the best genotype models. The distance between SNPs indicates the intensity of the interactions. The colors indicate the type of interactions. Red, orange, and green denotes a high degree, lesser degree, and weak interaction, respectively"

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